Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015893507.1_cds_XP_016447393.1_42159
CDS Infomation

[gene=LOC107772406] [db_xref=GeneID:107772406] [protein=scarecrow-like protein 3] [protein_id=XP_016447393.1] [location=complement(56068..57483)] [gbkey=CDS]
Sequence

ATGTTACAAGATGATGGTTCATCTTCTGTGACATCATCATCACCTCTTCAAATATTTCCA
ATGATGTCACTATCACCTGGTTTTAGTTCATCAAATCAGTGGCTTAAGGAGCTGAAATCT
GAAGAAAGAGGATTGTATTTAATACACCTTTTACTTGCTTGTGCTAATCATGTTTCTTCT
GGTAGTTTTGAAAATGCTAATATAGCACTTGACCATATTTGTCAACTTGCTTCTCCTAAT
GGAGATACTATGCAAAGAATTGCTTCGTATTTTACTGAGGCATTAGCTGATAGGATTCTT
AGAAGTTGGTCTGGTATTTGTAAGGCATTGCGTTCGACTAAGTTATCGGTTGTCTCAGAA
GATATTTTAGTTAGGAAAATGTTTTTCGAGTTTTTTCCGTTTTTGAAGGTTGCTTTTGTG
GTTACAAATCAAGCTATAATTGAAGCTATGGAAGGTGAAAAAATGGTTCATATCGTTGAT
CTTAATGCCTCTGAACCGTTGCAATGGCGTGCGTTACTTCAGGACTTAAGTGCACGTCCT
GAAGGACCGCCTCATTTGCGCATAACGGGGGTTCATCAGCAAAAAGAGGTGTTGGATCAA
ATGGCACATGTACTTACTGAAGAAGCCGAAAAGTTGGATATTCCTTTTCAGTTCAATCAA
GTAGTTAGCCAATTGGAAGATCTTGATGTTGAGAAATTGCGCATTAAAACTGGGGAGGCG
CTTGCGATTAGTTCAGTTATGCAATTGCACACTCTTTTTGCCCATGACAATGAACCTCAA
AAGAAGTCCCCTTTGCCTTTTAAGCATTCAAATGGTGTTAATCTGCATAAGGCATTGATC
AACCAAAATACCTTAGGGGAGTTGCTTGAAAAAGATATGGGCCATATCGCTAATGGTTAT
AGTCCAAGTAATGACACGGCTTCTTCGCCCCCACTATGTTCAACAACAAAGATGGATGGT
TTCCTCAATGCTTTGTGGGGTTTATCACCAAAAGTTATGGTTGTAACAGAACAAGATTCT
AACCATAATGGAATAACACTTATGGAGAGGCTATCCGAGTCGTTACATTATTATGCTGCA
TTATTCGATTGTCTAGAATTCGCATTGCCAAGAACATCATTGGAGAGGTTAAAGGTGGAA
AAAATGCTGTTAGGTGAGGAGATTAAGAACGTTATATCATGTGAAGGAATCGAACGAAAG
GAGAGGCACGAGAAGCTCGAAAAATGGTTCCAAAGATTTGATGTAGCTGGTTTTGGAAAT
GTGCCTTTGAGTTATTATGCTATGTTGCAAGCAAGAAGGTTGTTGCAAAGTTACAGTTGT
GAAGGATACAAGATCAAAGAAGAGAATGGTTGTGTGGTGATCTGTTGGCACGATCGAGCT
CTTTTCTCAGTGTCATCTTGGAGGTGTAGGAAGTAA

Peptide Sequence

PEP ID

XP_016447393.1
PEP Infomation

PREDICTED: scarecrow-like protein 3 [Nicotiana tabacum]
Sequence

MLQDDGSSSVTSSSPLQIFPMMSLSPGFSSSNQWLKELKSEERGLYLIHLLLACANHVSS
GSFENANIALDHICQLASPNGDTMQRIASYFTEALADRILRSWSGICKALRSTKLSVVSE
DILVRKMFFEFFPFLKVAFVVTNQAIIEAMEGEKMVHIVDLNASEPLQWRALLQDLSARP
EGPPHLRITGVHQQKEVLDQMAHVLTEEAEKLDIPFQFNQVVSQLEDLDVEKLRIKTGEA
LAISSVMQLHTLFAHDNEPQKKSPLPFKHSNGVNLHKALINQNTLGELLEKDMGHIANGY
SPSNDTASSPPLCSTTKMDGFLNALWGLSPKVMVVTEQDSNHNGITLMERLSESLHYYAA
LFDCLEFALPRTSLERLKVEKMLLGEEIKNVISCEGIERKERHEKLEKWFQRFDVAGFGN
VPLSYYAMLQARRLLQSYSCEGYKIKEENGCVVICWHDRALFSVSSWRCRK

Transcript Sequence

Gene sequence data has not been registered.